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Parse all CNV files from a folder tree (all standard stations)

Source: R/ctd.R
read_cnv_folder_all.Rd

Reads every .cnv file in a folder tree and matches stations against the standard monitoring station list (not just AlgAware stations). Use for CTD profile and time-series plots.

Usage

read_cnv_folder_all(cnv_folder, station_mapper, standard_stations)

Arguments

cnv_folder

Path to parent Cnv/ folder (searched recursively).

station_mapper

Data frame from load_station_mapper().

standard_stations

Data frame from load_standard_stations().

Value

A data.frame with columns: canonical_name, region, latitude, longitude, pressure_dbar, chl_fluorescence, cruise, sample_date, file_path. Returns NULL if no valid files found.